Complete details can be found in our pre-print. Complete edge statistics: statistics.xlsx.
| LOD Repositories | Ontologies | Nodes | Edges | Node Properties | Edge Properties |
|---|---|---|---|---|---|
| 80 | 11 | 6,553,767 | 99,936,712 | 27,242,075 | 242,896,588 |
Node type distribution.
Node property distribution.
RNA node distribution.
Edge type distribution.
Edge property distribution.
Identification schemes for the main bio-entities. RO is used for grounding relationships' types.
| Entity Type | ID Scheme | Example |
|---|---|---|
| Variant | dbSNP COSMIC |
rs766102409 COSV60127483 |
| ncRNA | RNAcentral | URS00000478B7_9606 |
| mRNA | Ensembl | ENST00000713680 |
| circRNA | circBase | hsa_circ_0018046 |
| Chemical | ChEBI | CHEBI:4021 |
| Protein | PRO | PR:Q8WXF3 |
| Gene | Entrez | Entrez:1954 |
| Cell | CLO | CLO:0003725 |
| GO term | GO | GO:0140657 |
| Disease | Mondo | MONDO:0020683 |
| Phenotype | HPO | HP:0040064 |
| Anatomy | Uberon | UBERON:0002169 |
| Vaccine | VO | VO:0010137 |
| Pathway | PW Reactome WikiPathways |
PW:0000035 R-HSA-9837999 WP5090 |